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July 29, 2008

lessons learned

“A human being should be able to change a diaper, plan an invasion, butcher a hog, conn a ship, design a building, write a sonnet, balance accounts, build a wall, set a bone, comfort the dying, take orders, give orders, cooperate, act alone, solve equations, analyze a new problem, pitch manure, program a computer, cook a tasty meal, fight efficiently, die gallantly. Specialization is for insects.”
- Lazarus Long, in Robert Heinlein's Time Enough for Love
Finding focus has long been one of the difficulties of my life, but I have absorbed a few important lessons from my time at this graduate program. One of the many tiny epiphanies which I have internalized is to realize that I do have limitations. There are only so many projects at which even I can multitask before those efforts become distractions to one another, and my performance on all of them begins to suffer. Sometimes less really is more, and a smaller scope can provide more focus on individual projects - and I can really lend them the intensity of analysis that I need to adequately develop their potential.

July 22, 2008

come on, loosen up!

the inexorable tide of time

"You know how I love to watch you work, but I’ve got my country’s five-hundredth anniversary to plan, my wedding to arrange, my wife to murder, and Guilder to frame for it. I’m swamped."
- Prince Humperdinck, the Princess Bride

The Book of Hours that will determine my ebb and flow for the next six months:

  • Degree Application Deadline
    September 19, 2008
    This is the last date by which to apply for graduation using UF's registration system.
    I've completed this, but I should reconfirm.
  • Doctoral dissertation first submission
    October 13, 2008 4:00 PM
    While this is not actually a deadline that I am responsible for, it is a good target date to keep in mind in order to complete my defense by the following date.
  • Master’s Thesis First Submission
    November 3, 2008 4:00 PM
    Thesis first submission (defended, signed, formatted, on paper) to Editorial (160 Grinter) for review. While this is technically a draft submission, everything actually already needs to be done by this date in order to satisfy my committee.
  • Final Thesis Submission
    December 2, 2008 5:00 PM
    Deadline for “Final Clearance” status in the EDM system in order to qualify for degree this term. If there were any significant or substantial changes from two weeks ago, I'd never have passed the defense. This deadline is really for sorting out additional paperwork and dealing with technical formatting issues and printing standards.
  • Degree Certification
    December 23, 2008
    Congratulations. Assuming that you didn't screw things up, you're done and you can move on with your life. Have a very merry Christmas!

July 21, 2008

closing titles

Behold the closing titles of quirky cinema auteur Wes Anderson's The Life Aquatic with Steve Zissou, performed to the tune of David Bowie's racous ballad, "Queen Bitch":

Of course, all of this is an acknowledged homage to an earlier zany adventure-comedy and undeniable cult-classic:

July 16, 2008

coffee good

"Coffee is the common man's gold, and like gold it brings to every man the feeling of luxury and nobility.... Where coffee is served there is grace and splendour and friendship and happiness."
- attributed to Abd al-Qadir

It is amazing how as little as a quarter cup of coffee can turn your whole morning around. I may someday dedicate an entire sub-category of tag on this website to it, given how frequently the magic drug appears in my musings.

That, and in my old age I am finding that perhaps there is something to this whole "go to bed before midnight" thing. I've been collapsing at around eleven in the evening these days, which makes rising at seven much less of a battle. I still don't think I'll ever be the sort to get up and go running at six - as I suspect that neither coffee nor an early slumber will ever make me a morning person.

After all, phenotype can be limited by genotypic potential, no matter what the environment.

July 9, 2008

why we transform our data

Flight data for Scirtothrips dorsalis around two hosts, Rosa 'Radrazz' and Conocarpus erectus for approximately one year - before and after transformation by the natural log. Kindly ignore the posted trendlines, as they are mostly irrelevant and unduly influenced by start and endpoints.

BEFORE:

There are obviously absolutely more thrips flying around the roses than around the buttonwood year-round, but a more interesting question to ask is whether the rate changes between those notable peaks and valleys are similar for the two hosts. This graph suggests some similarity between the two flight populations, but scale makes it difficult to eyeball an answer. I am further plagued by inconstant variance that increases as a function of the mean - not an atypical trend among natural biological populations. This linear transformation I will apply helps to normalize the data, and it will also remove some of the problems of scale:

AFTER:

While I still need to go through and confirm statistically that these weekly rate changes line up between the two hosts, it does appear a lot more likely that thrips are changing their weekly flight behavior around both hosts in a similar fashion throughout the year. Host is certainly relevant to the total number of thrips available for flight (data not presented here!), but other factors which are constant for both hosts might explain the relative weekly rate of thrips in flight about those hosts.

I obviously need to compare this data to environmental factors, and to the on-plant population densities that I have also recorded during the last year.

Is this progress? I don't really know. It is a hell of a lot of data to poke through.

love and cryptozoology

“An old Sherpa once observed: ‘There is a yeti in the back of everyone’s mind; only the blessed are not haunted by it.’”

I am proud to announce that another one of my good friend Germ's stories has been published by the Escape Artists network of podcasts. Maybe I am biased, but I think that this is one of his better tales, full of the ambiguity of the human heart - and more than one of my beloved allegedly extinct creatures. I strongly suggest that you either read the original publication or download the episode and listen.

July 6, 2008

goodbye, little kitty

How can you write a eulogy for a princess?

Tango "spooky" Derksen, 1992 - July 6th, 2008.

July 1, 2008

since I seem to be in the mood for it

"Ow! Damn roses! Damn thorns!"
- Seymour Krelborn, Little Shop of Horrors

I totally feel his pain. I was pruning again today, and those things are vicious. Just remember, whatever you do - don't feed the plants!